Pseudomonas aeruginosa PAO1, PA5327 (sphC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051872 sphingosine catabolic process
IDA
Inferred from Direct Assay 		ECO:0000096
electrophoretic mobility shift assay evidence		 24465209 Reviewed by curator
Biological Process GO:0051872 sphingosine catabolic process
IDA
Inferred from Direct Assay 		ECO:0000096
electrophoretic mobility shift assay evidence
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003885 D-arabinono-1,4-lactone oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56176
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43762 L-GULONOLACTONE OXIDASE IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase-like 19 439 3.1E-92
Gene3D G3DSA:3.30.465.10 - IPR016169 FAD-binding, type PCMH, subdomain 2 81 206 2.7E-26
FunFam G3DSA:3.30.70.2520:FF:000002 FAD-linked oxidoreductase - - 310 401 1.2E-57
Gene3D G3DSA:1.10.45.10 - IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 404 440 4.7E-12
Pfam PF01565 FAD binding domain IPR006094 FAD linked oxidase, N-terminal 36 161 5.5E-22
Pfam PF04030 D-arabinono-1,4-lactone oxidase IPR007173 D-arabinono-1,4-lactone oxidase, C-terminal domain 186 436 1.9E-65
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like IPR036318 FAD-binding, type PCMH-like superfamily 15 189 8.88E-41
Gene3D G3DSA:3.30.70.2520 - - - 310 401 1.8E-26
Gene3D G3DSA:3.30.43.10 - IPR016167 FAD-binding, type PCMH, subdomain 1 15 79 1.4E-19
PIRSF PIRSF000136 LGO_GLO IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase-like 11 441 1.3E-89
NCBIfam TIGR01679 JCVI: FAD-linked oxidoreductase - - 19 440 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.