Pseudomonas aeruginosa PAO1, PA5349 (rubB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015045 rubredoxin-NAD(P)+ reductase activity
IGI
Inferred from Genetic Interaction 		ECO:0000316
genetic interaction evidence used in manual assertion		 14574114 Reviewed by curator
Biological Process GO:0043448 alkane catabolic process
IGI
Inferred from Genetic Interaction 		ECO:0000316
genetic interaction evidence used in manual assertion		 14574114 Reviewed by curator
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07992
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc P221-PWY octane oxidation 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 232 248 6.6E-22
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 359 374 4.1E-15
PANTHER PTHR43429 PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING - - 6 308 7.2E-60
FunFam G3DSA:3.50.50.60:FF:000319 Rubredoxin-NAD(+) reductase - - 110 244 2.0E-70
Pfam PF18113 Rubredoxin binding C-terminal domain IPR041364 Rubredoxin binding domain 309 379 2.8E-24
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 6 28 4.1E-15
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 1 323 5.4E-36
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 257 279 6.6E-22
FunFam G3DSA:3.30.390.120:FF:000002 Rubredoxin-NAD(+) reductase - - 316 379 8.9E-33
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 102 120 6.6E-22
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 147 165 6.6E-22
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 8 280 1.0E-95
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase IPR023753 FAD/NAD(P)-binding domain 7 281 5.6E-51
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 7 26 6.6E-22
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 272 279 4.1E-15
Gene3D G3DSA:3.30.390.120 - - - 316 379 1.1E-25
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 110 244 1.0E-95
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 147 172 4.1E-15
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 233 247 4.1E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.