Pseudomonas aeruginosa PAO1, PA5358 (ubiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0051188 obsolete cofactor biosynthetic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0009019 tRNA (guanine-N1-)-methyltransferase activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004659 prenyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01474
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01040
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc ALL-CHORISMATE-PWY superpathway of chorismate metabolism 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Ubiquinone biosynthesis ECO:0000037
not_recorded
PseudoCyc PWY-6708 ubiquinol-8 biosynthesis (prokaryotic) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.357.140:FF:000002 4-hydroxybenzoate octaprenyltransferase - - 29 174 1.3E-67
CDD cd13959 PT_UbiA_COQ2 IPR039653 Prenyltransferase 24 292 3.28762E-109
NCBIfam TIGR01474 JCVI: 4-hydroxybenzoate polyprenyltransferase IPR006370 4-hydroxybenzoate polyprenyltransferase-like 18 293 1.1E-105
FunFam G3DSA:1.20.120.1780:FF:000001 4-hydroxybenzoate octaprenyltransferase - - 175 296 1.2E-42
Gene3D G3DSA:1.10.357.140 UbiA prenyltransferase IPR044878 UbiA prenyltransferase superfamily 29 175 1.6E-37
PANTHER PTHR11048 PRENYLTRANSFERASES IPR039653 Prenyltransferase 13 294 4.4E-80
Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. IPR006370 4-hydroxybenzoate polyprenyltransferase-like 12 294 29.34053
Gene3D G3DSA:1.20.120.1780 UbiA prenyltransferase - - 176 296 8.0E-33
Pfam PF01040 UbiA prenyltransferase family IPR000537 UbiA prenyltransferase family 34 278 3.9E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.