Pseudomonas aeruginosa PAO1, PA5360 (phoB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0071978	bacterial-type flagellum-dependent swarming motility	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	24023943	Reviewed by curator
Biological Process	GO:0080040	positive regulation of cellular response to phosphate starvation	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	23657684	Reviewed by curator
Molecular Function	GO:0000156	phosphorelay response regulator activity	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	11703664	Reviewed by curator
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006817	phosphate ion transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02154	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000156	phosphorelay response regulator activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02154	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class Transcriptional regulators Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Two-component System		ECO:0000037 not_recorded
KEGG	pae02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	4	117	8.3E-46
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	128	226	7.11E-29
FunFam	G3DSA:1.10.10.10:FF:000011	Phosphate regulon transcriptional regulator PhoB	-	-	125	229	2.0E-52
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	3	125	2.85E-44
FunFam	G3DSA:3.40.50.2300:FF:000001	DNA-binding response regulator PhoB	-	-	2	85	1.2E-27
CDD	cd00383	trans_reg_C	IPR001867	OmpR/PhoB-type DNA-binding domain	138	225	5.07947E-33
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	6	117	1.6E-30
NCBIfam	TIGR02154	JCVI: phosphate regulon transcriptional regulator PhoB	IPR011879	Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB	3	226	1.2E-108
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	129	229	3.4E-31
SMART	SM00862	Trans_reg_C_3	IPR001867	OmpR/PhoB-type DNA-binding domain	151	225	6.4E-24
Gene3D	G3DSA:6.10.250.690	-	-	-	86	123	6.8E-19
Gene3D	G3DSA:3.40.50.2300	-	-	-	2	85	7.3E-22
Pfam	PF00486	Transcriptional regulatory protein, C terminal	IPR001867	OmpR/PhoB-type DNA-binding domain	151	225	4.1E-24
CDD	cd17618	REC_OmpR_PhoB	-	-	4	121	1.04053E-75
PANTHER	PTHR48111	REGULATOR OF RPOS	IPR039420	Transcriptional regulatory protein WalR-like	5	228	1.5E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.