Pseudomonas aeruginosa PAO1, PA5374 (betI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13977 | BetI-type transcriptional repressor, C-terminal | IPR039538 | BetI-type transcriptional repressor, C-terminal | 84 | 192 | 1.2E-31 |
| PANTHER | PTHR30055 | HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR | - | - | 8 | 193 | 4.4E-13 |
| Gene3D | G3DSA:1.10.357.10 | Tetracycline Repressor, domain 2 | - | - | 6 | 196 | 4.2E-43 |
| SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 5 | 79 | 1.08E-13 |
| Pfam | PF00440 | Bacterial regulatory proteins, tetR family | IPR001647 | DNA-binding HTH domain, TetR-type | 14 | 59 | 1.8E-9 |
| NCBIfam | TIGR03384 | JCVI: transcriptional regulator BetI | IPR017757 | Transcriptional repressor BetI | 2 | 192 | 5.0E-77 |
| SUPERFAMILY | SSF48498 | Tetracyclin repressor-like, C-terminal domain | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | 81 | 193 | 9.24E-24 |
| Hamap | MF_00768 | HTH-type transcriptional regulator BetI [betI]. | IPR017757 | Transcriptional repressor BetI | 1 | 197 | 110.912712 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.