Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0042413 | carnitine catabolic process | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
19406895 | Reviewed by curator |
Molecular Function | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Inferred from Sequence Model
Term mapped from: InterPro:PF00725
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1040.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006631 | fatty acid metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF02737
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0070403 | NAD+ binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02737
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCyc | PWYB-96 | Carnitine Catabolism to Glycine Betaine | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.40.50.720 | - | - | - | 4 | 188 | 4.0E-47 |
SUPERFAMILY | SSF48179 | 6-phosphogluconate dehydrogenase C-terminal domain-like | IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | 188 | 275 | 1.28E-14 |
PIRSF | PIRSF000105 | HCDH | IPR022694 | 3-hydroxyacyl-CoA dehydrogenase | 4 | 301 | 2.7E-55 |
FunFam | G3DSA:3.40.50.720:FF:000522 | L-carnitine dehydrogenase | - | - | 4 | 188 | 1.6E-112 |
FunFam | G3DSA:1.10.1040.10:FF:000027 | L-carnitine dehydrogenase | - | - | 189 | 310 | 5.4E-70 |
Pfam | PF02737 | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain | IPR006176 | 3-hydroxyacyl-CoA dehydrogenase, NAD binding | 11 | 184 | 6.3E-39 |
Pfam | PF00725 | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain | IPR006108 | 3-hydroxyacyl-CoA dehydrogenase, C-terminal | 188 | 256 | 1.0E-14 |
Gene3D | G3DSA:1.10.1040.10 | - | IPR013328 | 6-phosphogluconate dehydrogenase, domain 2 | 189 | 310 | 1.8E-27 |
PANTHER | PTHR48075 | 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN | - | - | 6 | 295 | 5.5E-60 |
SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 6 | 185 | 9.86E-46 |
Hamap | MF_02129 | L-carnitine dehydrogenase [lcdH]. | IPR026578 | L-carnitine dehydrogenase | 8 | 318 | 54.179604 |