Pseudomonas aeruginosa PAO1, PA5387 (cdhC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0042413 | carnitine catabolic process | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
19406895 | Reviewed by curator |
| Molecular Function | GO:0043720 | 3-keto-5-aminohexanoate cleavage activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF05853
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | IPR013785 | Aldolase-type TIM barrel | 2 | 294 | 5.9E-101 |
| FunFam | G3DSA:3.20.20.70:FF:000224 | 3-keto-5-aminohexanoate cleavage enzyme | - | - | 2 | 294 | 0.0 |
| PANTHER | PTHR37418 | 3-KETO-5-AMINOHEXANOATE CLEAVAGE ENZYME-RELATED | IPR008567 | Beta-keto acid cleavage enzymes | 1 | 293 | 1.1E-112 |
| Pfam | PF05853 | beta-keto acid cleavage enzyme | IPR008567 | Beta-keto acid cleavage enzymes | 5 | 291 | 6.6E-96 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.