Pseudomonas aeruginosa PAO1, PA5455

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009243 O antigen biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
23341552 Reviewed by curator
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: CAZy:GT4
ECO:0000250
sequence similarity evidence used in manual assertion
18838391 Reviewed by curator
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
23341552 Reviewed by curator
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
23341552 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP common polysaccharide antigen (CBA) biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 303 482 8.37E-20
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 309 520 8.0E-28
PANTHER PTHR46656 PUTATIVE-RELATED - - 16 523 5.9E-80
Pfam PF13692 Glycosyl transferases group 1 - - 327 461 2.5E-8
MobiDBLite mobidb-lite consensus disorder prediction - - 204 223 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.