Pseudomonas aeruginosa PAO1, PA5501 (znuB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006829 zinc ion transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 9680209 Reviewed by curator
Biological Process GO:0010043 response to zinc ion
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 24086521 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30477
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30477
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30477
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd06550 TM_ABC_iron-siderophores_like - - 20 255 1.80795E-29
FunFam G3DSA:1.10.3470.10:FF:000002 Zinc ABC transporter permease subunit ZnuB - - 5 261 3.5E-129
PANTHER PTHR30477 ABC-TRANSPORTER METAL-BINDING PROTEIN IPR001626 ABC transporter, TroCD-like 3 259 4.6E-72
SUPERFAMILY SSF81345 ABC transporter involved in vitamin B12 uptake, BtuC IPR037294 ABC transporter, BtuC-like 3 253 7.72E-40
Pfam PF00950 ABC 3 transport family IPR001626 ABC transporter, TroCD-like 2 256 2.5E-78
Gene3D G3DSA:1.10.3470.10 ABC transporter involved in vitamin B12 uptake, BtuC IPR037294 ABC transporter, BtuC-like 4 261 3.9E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.