Pseudomonas aeruginosa UCBPP-PA14, PA14_03010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 51 74 2.0E-6
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 17 91 1.03E-18
SUPERFAMILY SSF48498 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 96 221 7.12E-34
Pfam PF17938 Tetracyclin repressor-like, C-terminal domain IPR041474 HTH-type transcriptional repressor NicS, C-terminal 98 216 2.3E-46
MobiDBLite mobidb-lite consensus disorder prediction 1 26 -
MobiDBLite mobidb-lite consensus disorder prediction 10 26 -
ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 DNA-binding HTH domain, TetR-type 24 84 19.604
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 30 76 6.2E-14
Gene3D G3DSA:1.10.357.10 26 222 4.1E-62
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 30 43 2.0E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.