Pseudomonas aeruginosa UCBPP-PA14, PA14_03220 (vgrG2b)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69279 Phage tail proteins - - 197 365 1.31E-31
Pfam PF13296 Putative type VI secretion system Rhs element Vgr IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain 475 581 3.2E-34
MobiDBLite mobidb-lite consensus disorder prediction - - 263 291 -
SUPERFAMILY SSF69279 Phage tail proteins - - 9 182 2.04E-47
Pfam PF05954 Phage tail baseplate hub (GPD) - - 27 327 1.7E-75
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 9 493 0.0
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 19 502 1.2E-119
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 364 451 2.35E-33
Gene3D G3DSA:3.55.50.10 - - - 96 187 1.4E-78
Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IPR018769 Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345 615 758 8.7E-48
PANTHER PTHR32305 - - - 3 724 0.0
Gene3D G3DSA:4.10.220.110 - - - 221 284 1.4E-78
MobiDBLite mobidb-lite consensus disorder prediction - - 274 289 -
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 358 456 3.0E-39
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 493 1.8E-9
Gene3D G3DSA:2.30.110.50 - - - 21 328 1.4E-78
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 386 453 2.0E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.