Pseudomonas aeruginosa UCBPP-PA14, PA14_03880 (spuB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046203 spermidine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0298
 ECO:0000249
sequence similarity evidence used in automatic assertion		 21622750
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004356 glutamate-ammonia ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.20.70
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006807 nitrogen compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.20.70
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006542 glutamine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.20.70
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class
Putative enzymes Other UCBPP-PA14 genes in this class
Carbon compound catabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM01230 Gln_synt_C_2 IPR008146 Glutamine synthetase, catalytic domain 114 370 2.5E-112
SUPERFAMILY SSF55931 Glutamine synthetase/guanido kinase IPR014746 Glutamine synthetase/guanido kinase, catalytic domain 114 449 2.35E-106
FunFam G3DSA:3.10.20.70:FF:000011 Glutamine synthetase - - 4 115 1.1E-61
Gene3D G3DSA:3.10.20.70 - IPR036651 Glutamine synthetase, N-terminal domain superfamily 3 115 2.8E-7
SUPERFAMILY SSF54368 Glutamine synthetase, N-terminal domain IPR036651 Glutamine synthetase, N-terminal domain superfamily 6 113 2.62E-17
Pfam PF00120 Glutamine synthetase, catalytic domain IPR008146 Glutamine synthetase, catalytic domain 115 446 2.5E-109
Gene3D G3DSA:3.30.590.10 Glutamine synthetase/guanido kinase, catalytic domain - - 117 449 2.2E-94
FunFam G3DSA:3.30.590.10:FF:000005 Probable glutamine synthetase - - 117 451 8.0E-125
PANTHER PTHR43785 GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE - - 6 449 4.8E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.