Pseudomonas aeruginosa UCBPP-PA14, PA14_05420

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02311	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR46796	HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED	-	-	11	263	6.3E-51
SUPERFAMILY	SSF51215	Regulatory protein AraC	IPR037923	Transcription regulator HTH-like	21	144	1.2E-15
Pfam	PF12833	Helix-turn-helix domain	IPR018060	DNA binding HTH domain, AraC-type	183	260	2.8E-20
SMART	SM00342	aracneu4	IPR018060	DNA binding HTH domain, AraC-type	177	259	7.2E-30
Pfam	PF02311	AraC-like ligand binding domain	IPR003313	AraC-type arabinose-binding/dimerisation domain	12	141	9.0E-22
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	161	211	8.51E-10
Gene3D	G3DSA:1.10.10.60	-	-	-	216	264	2.2E-10
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	213	261	4.48E-9
Gene3D	G3DSA:1.10.10.60	-	-	-	161	215	1.2E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.