Pseudomonas aeruginosa UCBPP-PA14, PA14_07970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01258
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02419 JCVI: phage/conjugal plasmid C-4 type zinc finger protein, TraR family IPR012783 Zinc finger, C4 DksA/TraR-type 3 64 2.1E-16
Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger IPR000962 Zinc finger, DksA/TraR C4-type 33 65 1.1E-13
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain) - - 35 65 3.42E-7
PRINTS PR00618 DksA/TraR zinc finger signature IPR020460 Zinc finger, DksA/TraR C4-type, bacteria 35 46 1.3E-5
PANTHER PTHR38777 FELS-2 PROPHAGE PROTEIN - - 1 65 2.9E-21
Gene3D G3DSA:1.20.120.910 - - - 4 66 2.1E-9
PRINTS PR00618 DksA/TraR zinc finger signature IPR020460 Zinc finger, DksA/TraR C4-type, bacteria 47 59 1.3E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.