Pseudomonas aeruginosa UCBPP-PA14, PA14_09690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06170
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 175 187 4.2E-10
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 132 206 2.82E-18
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 142 199 5.5E-16
Gene3D G3DSA:3.40.50.2300 - - - 3 133 4.5E-30
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 9 156 1.1E-33
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 159 175 4.2E-10
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 136 203 6.2E-18
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 7 118 3.5E-24
CDD cd17537 REC_FixJ - - 7 120 2.30344E-62
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 145 200 5.26314E-12
PANTHER PTHR44688 - - - 4 204 1.1E-35
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 145 159 4.2E-10
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 143 199 2.2E-15
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 9 118 1.7E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.