Pseudomonas aeruginosa UCBPP-PA14, PA14_16800

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01730	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01730	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01730	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.40.50.100	-	-	-	57	199	8.5E-36
Gene3D	G3DSA:2.40.30.170	-	-	-	51	261	8.5E-36
FunFam	G3DSA:2.40.30.170:FF:000014	Efflux RND transporter periplasmic adaptor subunit	-	-	197	261	5.4E-27
Gene3D	G3DSA:2.40.420.20	-	-	-	263	354	1.9E-19
Coils	Coil	Coil	-	-	136	156	-
Coils	Coil	Coil	-	-	98	125	-
PANTHER	PTHR30469	MULTIDRUG RESISTANCE PROTEIN MDTA	-	-	8	356	1.8E-76
NCBIfam	TIGR01730	JCVI: efflux RND transporter periplasmic adaptor subunit	IPR006143	RND efflux pump, membrane fusion protein	44	353	2.3E-75
Pfam	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion	IPR032317	RND efflux pump, membrane fusion protein, barrel-sandwich domain	61	262	3.7E-20
Gene3D	G3DSA:1.10.287.470	Helix hairpin bin	-	-	92	165	8.5E-36
SUPERFAMILY	SSF111369	HlyD-like secretion proteins	-	-	47	276	3.53E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.