Pseudomonas aeruginosa UCBPP-PA14, PA14_17610 (potD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0019808 polyamine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00909
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00909
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00909
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 86 99 1.8E-40
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 117 133 1.8E-40
PIRSF PIRSF019574 Periplasmic_polyamine_BP IPR001188 Spermidine/putrescine-binding periplasmic protein 1 354 9.3E-99
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 254 273 1.8E-40
CDD cd13590 PBP2_PotD_PotF_like - - 24 348 1.62524E-126
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 27 43 1.8E-40
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 204 223 1.8E-40
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 37 318 6.6E-32
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 22 352 2.76E-83
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 70 84 1.8E-40
Gene3D G3DSA:3.40.190.10 - - - 126 349 2.1E-106
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 145 159 1.8E-40
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 299 325 1.8E-40
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 43 64 1.8E-40
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 167 186 1.8E-40
PANTHER PTHR30222 SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN - - 7 351 3.6E-80
Gene3D G3DSA:3.40.190.10 - - - 24 321 2.1E-106

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.