Pseudomonas aeruginosa UCBPP-PA14, PA14_18020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009058 | biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF02567
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02567
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00654 | JCVI: PhzF family phenazine biosynthesis isomerase | IPR003719 | Phenazine biosynthesis PhzF-like | 1 | 259 | 1.7E-41 |
| Gene3D | G3DSA:3.10.310.10 | Diaminopimelate Epimerase; Chain A, domain 1 | - | - | 117 | 248 | 9.7E-99 |
| Pfam | PF02567 | Phenazine biosynthesis-like protein | IPR003719 | Phenazine biosynthesis PhzF-like | 8 | 256 | 2.3E-62 |
| SUPERFAMILY | SSF54506 | Diaminopimelate epimerase-like | - | - | 1 | 260 | 1.16E-85 |
| Gene3D | G3DSA:3.10.310.10 | Diaminopimelate Epimerase; Chain A, domain 1 | - | - | 5 | 252 | 9.7E-99 |
| PANTHER | PTHR13774 | PHENAZINE BIOSYNTHESIS PROTEIN | IPR003719 | Phenazine biosynthesis PhzF-like | 4 | 258 | 8.7E-79 |
| PIRSF | PIRSF016184 | Ismrse_PhzF | IPR003719 | Phenazine biosynthesis PhzF-like | 1 | 260 | 4.6E-62 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.