Pseudomonas aeruginosa UCBPP-PA14, PA14_18310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00538
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:1901505 carbohydrate derivative transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00538
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class
Adaptation, Protection Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103481 Multidrug resistance efflux transporter EmrE - - 37 122 1.31E-11
PANTHER PTHR30561 SMR FAMILY PROTON-DEPENDENT DRUG EFFLUX TRANSPORTER SUGE IPR000390 Small drug/metabolite transporter protein family 6 136 9.2E-18
Gene3D G3DSA:1.10.3730.20 - - - 4 126 3.6E-15
FunFam G3DSA:1.10.3730.20:FF:000028 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF - - 4 126 1.3E-76
Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF 5 125 20.666847

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.