Pseudomonas aeruginosa UCBPP-PA14, PA14_18320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01869
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:1901505 carbohydrate derivative transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01869
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class
Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00892 EamA-like transporter family IPR000620 EamA domain 39 111 5.9E-9
Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE 1 115 29.123032
FunFam G3DSA:1.10.3730.20:FF:000002 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE - - 1 114 6.4E-38
SUPERFAMILY SSF103481 Multidrug resistance efflux transporter EmrE - - 34 113 1.83E-13
PANTHER PTHR30561 SMR FAMILY PROTON-DEPENDENT DRUG EFFLUX TRANSPORTER SUGE IPR000390 Small drug/metabolite transporter protein family 1 114 3.5E-18
Gene3D G3DSA:1.10.3730.20 - - - 4 114 2.9E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.