Pseudomonas aeruginosa UCBPP-PA14, PA14_18590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCCGCCGACC-N78-GGTCGGCGGCG | 1597070 | 1597169 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| algD promoter | 1595670 | 1595718 | - |
|
7961422 | Details |
| algD promoter | 1595671 | 1595719 | - |
|
3108855 | Details |
| algD promoter | 1595671 | 1595719 | - |
|
2167423 | Details |
| algD promoter far-upstream sequences | 1596005 | 1596105 | - |
|
2121718 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
2121708 | Details |
| algD promoter region | 1595729 | 1595785 | - |
|
3149945 | Details |
| RpoN retarded fragment of algD promoter | 1595620 | 1595779 | + |
|
10792721 | Details |
| AlgR retarded fragment I upstream of algD gene | 1595889 | 1595997 | + |
|
Details | |
| AlgR retarded fragment II upstream of algD gene | 1595945 | 1596107 | + |
|
Details | |
| AlgR protected fragment upstream of algD gene | 1596056 | 1596145 | + |
|
Details | |
| Region upstream of the algD gene | 1596061 | 1596145 | - |
|
1447138 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
2496102 | Details |
| AlgR retarded fragment I upstream of algD gene | 1595449 | 1595838 | + |
|
1907266 | Details |
| AlgR retarded fragment II upstream of algD gene | 1595550 | 1595838 | + |
|
1907266 | Details |
| AlgR retarded fragment III upstream of algD gene | 1595384 | 1595726 | + |
|
1907266 | Details |
| AlgR protected fragment upstream of algD gene | 1596056 | 1596153 | + |
|
1907266 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
1899859 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
9218775 | Details |
| IHF binding fragment A at algD gene | 1595547 | 1595721 | + |
|
9218775 | Details |
| algD promoter region | 1595729 | 1595785 | - |
|
2109318 | Details |
| AlgR retarded RB3 fragment at algD gene | 1595661 | 1595827 | - |
|
1400214 | Details |
| AlgR protected RB3 fragment at algD gene | 1595690 | 1595720 | - |
|
1400214 | Details |
| AlgR retarded RB2 fragment at algD gene | 1595798 | 1595827 | - |
|
1400214 | Details |
| AlgR1 retarded fragment at algD gene | 1596056 | 1596145 | + |
|
8381538 | Details |
| IHF retarded fragment at algD gene | 1595571 | 1595775 | + |
|
Details | |
| IHF-binding element 1-1 | 1595735 | 1595775 | - |
|
Details | |
| IHF-binding element 1-2 | 1595735 | 1595775 | - |
|
Details | |
| IHF binding site at algD gene | 1595726 | 1595755 | - |
|
1472055 | Details |
| IHF protected fragment at algD gene | 1595725 | 1595760 | - |
|
1472055 | Details |
| algD promoter | 1595471 | 1595720 | - |
|
11443106 | Details |
| algD promoter | 1595471 | 1595720 | - |
|
Details | |
| algD promoter | 1595471 | 1595720 | - |
|
14645293 | Details |
| CRP responsive element upstream of algD promoter | 1595830 | 1596079 | - |
|
1665196 | Details |
| CRP retarded fragment upstream of algD gene | 1595825 | 1596079 | - |
|
1665196 | Details |
| AlgB binding fragment upstream of algDKEGLIJF oper | 1595698 | 1595947 | - |
|
Details |