Pseudomonas aeruginosa UCBPP-PA14, PA14_18700 (rnt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004540 ribonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06134
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006396 RNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06134
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class
DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53098 Ribonuclease H-like IPR012337 Ribonuclease H-like superfamily 21 219 3.19E-57
Hamap MF_00157 Ribonuclease T [rnt]. IPR005987 Ribonuclease T 1 224 112.438721
SMART SM00479 exoiiiendus IPR013520 Exonuclease, RNase T/DNA polymerase III 30 215 7.7E-24
FunFam G3DSA:3.30.420.10:FF:000009 Ribonuclease T - - 21 224 5.3E-110
CDD cd06134 RNaseT IPR005987 Ribonuclease T 25 213 0.0
PANTHER PTHR30231 DNA POLYMERASE III SUBUNIT EPSILON - - 32 216 3.8E-20
NCBIfam TIGR01298 JCVI: ribonuclease T IPR005987 Ribonuclease T 22 221 4.7E-116
Pfam PF00929 Exonuclease IPR013520 Exonuclease, RNase T/DNA polymerase III 32 206 3.6E-31
Gene3D G3DSA:3.30.420.10 - IPR036397 Ribonuclease H superfamily 19 224 3.5E-61

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.