Pseudomonas aeruginosa UCBPP-PA14, PA14_20080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.30.170 | - | - | - | 214 | 322 | 1.3E-11 |
| Gene3D | G3DSA:1.10.287.470 | Helix hairpin bin | - | - | 103 | 167 | 7.9E-12 |
| Gene3D | G3DSA:1.10.287.470 | Helix hairpin bin | - | - | 73 | 95 | 1.1E-10 |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 107 | 165 | 5.75E-6 |
| PANTHER | PTHR30438 | UNCHARACTERIZED | - | - | 4 | 319 | 5.2E-102 |
| Gene3D | G3DSA:2.40.50.100 | - | - | - | 39 | 72 | 1.1E-10 |
| Coils | Coil | Coil | - | - | 176 | 203 | - |
| Pfam | PF16576 | Barrel-sandwich domain of CusB or HlyD membrane-fusion | IPR032317 | RND efflux pump, membrane fusion protein, barrel-sandwich domain | 40 | 286 | 3.4E-18 |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 174 | 253 | 7.32E-10 |
| Coils | Coil | Coil | - | - | 72 | 92 | - |
| Coils | Coil | Coil | - | - | 105 | 132 | - |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 40 | 94 | 4.97E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.