Pseudomonas aeruginosa UCBPP-PA14, PA14_20580 (amiC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0033218 amide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3364
 ECO:0000249
sequence similarity evidence used in automatic assertion		 8253087
Biological Process GO:0051346 negative regulation of hydrolase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3364
 ECO:0000249
sequence similarity evidence used in automatic assertion		 10893220
Biological Process GO:0034251 regulation of cellular amide catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3364
 ECO:0000249
sequence similarity evidence used in automatic assertion		 7813419
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00337
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0033218 amide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06357
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13433 Periplasmic binding protein domain - - 10 370 1.5E-115
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 10 375 3.36E-88
PANTHER PTHR47628 - - - 3 379 0.0
Gene3D G3DSA:3.40.50.2300 - - - 11 338 0.0
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 237 255 6.7E-8
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 71 81 6.7E-8
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 30 46 6.7E-8
Gene3D G3DSA:3.40.50.2300 - - - 123 353 0.0
CDD cd06357 PBP1_AmiC IPR039570 AmiC, periplasmic binding domain 10 366 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.