Pseudomonas aeruginosa UCBPP-PA14, PA14_20590 (amiR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0031564 transcription antitermination
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3363
 ECO:0000249
sequence similarity evidence used in automatic assertion		 8918468
Biological Process GO:0015976 carbon utilization
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3363
 ECO:0000249
sequence similarity evidence used in automatic assertion		 2495988
Biological Process GO:0034251 regulation of cellular amide catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3363
 ECO:0000249
sequence similarity evidence used in automatic assertion		 2495988
Biological Process GO:0044248 cellular catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3363
 ECO:0000249
sequence similarity evidence used in automatic assertion		 2495988
Biological Process GO:0051345 positive regulation of hydrolase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3363
 ECO:0000249
sequence similarity evidence used in automatic assertion		 2513374
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03861
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2300 - - - 1 128 5.6E-38
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 5 190 1.17E-44
Coils Coil Coil - - 122 149 -
SMART SM01012 ANTAR_2 IPR005561 ANTAR domain 135 190 4.4E-15
PANTHER PTHR43367 - - - 11 146 1.5E-13
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 145 196 3.2E-23
PIRSF PIRSF036382 RR_antiterminator IPR008327 Signal transduction response regulator, antiterminator 2 196 1.7E-50
Pfam PF03861 ANTAR domain IPR005561 ANTAR domain 137 190 3.2E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.