Pseudomonas aeruginosa UCBPP-PA14, PA14_20650 (dsdA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008721 D-serine ammonia-lyase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3357
 ECO:0000250
sequence similarity evidence used in manual assertion		 26957519 Reviewed by curator
Biological Process GO:0046416 D-amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008721 D-serine ammonia-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 98 440 9.74E-55
Hamap MF_01030 D-serine dehydratase [dsdA]. IPR011780 D-serine ammonia-lyase 1 448 260.173431
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 117 239 0.0
NCBIfam TIGR02035 JCVI: D-serine ammonia-lyase IPR011780 D-serine ammonia-lyase 10 440 0.0
PANTHER PTHR48078 THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED - - 80 443 2.3E-38
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 14 441 0.0
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 97 398 3.1E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.