Pseudomonas aeruginosa UCBPP-PA14, PA14_20870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07244
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006629 lipid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01734
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01103 Omp85 superfamily domain IPR000184 Bacterial surface antigen (D15) 449 728 1.8E-9
Gene3D G3DSA:3.10.20.310 membrane protein fhac - - 329 402 1.8E-9
CDD cd07205 Pat_PNPLA6_PNPLA7_NTE1_like - - 25 222 2.21716E-64
Gene3D G3DSA:3.40.1090.10 Cytosolic phospholipase A2 catalytic domain - - 15 126 4.2E-31
SUPERFAMILY SSF52151 FabD/lysophospholipase-like IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase 18 302 5.23E-61
Pfam PF07244 Surface antigen variable number repeat IPR010827 POTRA domain, BamA/TamA-like 333 393 7.0E-5
Gene3D G3DSA:3.40.1090.10 Cytosolic phospholipase A2 catalytic domain - - 133 269 1.1E-25
Pfam PF01734 Patatin-like phospholipase IPR002641 Patatin-like phospholipase domain 27 219 8.9E-28
PANTHER PTHR14226 NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER - - 22 317 3.1E-55
Gene3D G3DSA:2.40.160.50 membrane protein fhac: a member of the omp85/tpsb transporter family - - 411 728 3.1E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.