Pseudomonas aeruginosa UCBPP-PA14, PA14_41150 (nppC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0042884	microcin transport	IGI Inferred from Genetic Interaction	ECO:0000316 genetic interaction evidence used in manual assertion	25917903	Reviewed by curator
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pau02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	136	322	1.14E-18
Pfam	PF12911	N-terminal TM domain of oligopeptide transport permease C	IPR025966	Oligopeptide transport permease C-like, N-terminal domain	8	45	1.2E-6
FunFam	G3DSA:1.10.3720.10:FF:000005	Microcin C ABC transporter permease	-	-	130	334	4.8E-115
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	130	334	1.8E-19
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	140	321	1.13148E-18
PANTHER	PTHR30325	MEMBRANE COMPONENT OF ABC TRANSPORTER	-	-	2	339	0.0
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	158	338	1.1E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.