Pseudomonas aeruginosa UCBPP-PA14, PA14_41160 (nppD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042884 microcin transport
IGI
Inferred from Genetic Interaction 		ECO:0000316
genetic interaction evidence used in manual assertion		 25917903 Reviewed by curator
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015833 peptide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03257 ABC_NikE_OppD_transporters - - 5 239 1.09087E-106
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 34 234 4.3E-16
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 275 523 1.78E-65
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 5 256 2.55E-69
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 302 452 2.4E-29
CDD cd03257 ABC_NikE_OppD_transporters - - 274 506 2.87851E-107
Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 503 527 7.1E-5
Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 236 264 5.5E-5
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 310 501 2.9E-17
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 26 184 2.9E-29
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 271 535 1.0E-82
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 3 270 4.2E-86
FunFam G3DSA:3.40.50.300:FF:000016 Oligopeptide ABC transporter ATP-binding component - - 2 270 1.2E-115
PANTHER PTHR43776 TRANSPORT ATP-BINDING PROTEIN - - 271 529 0.0
FunFam G3DSA:3.40.50.300:FF:000016 Oligopeptide ABC transporter ATP-binding component - - 271 536 3.6E-102

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.