Pseudomonas aeruginosa UCBPP-PA14, PA14_46630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00654
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00654
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Central intermediary metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.310.10 Diaminopimelate Epimerase; Chain A, domain 1 - - 126 268 1.5E-74
NCBIfam TIGR00654 JCVI: PhzF family phenazine biosynthesis isomerase IPR003719 Phenazine biosynthesis PhzF-like 5 256 8.2E-51
Pfam PF02567 Phenazine biosynthesis-like protein IPR003719 Phenazine biosynthesis PhzF-like 10 256 2.2E-50
Gene3D G3DSA:3.10.310.10 Diaminopimelate Epimerase; Chain A, domain 1 - - 9 125 1.5E-74
PANTHER PTHR13774 PHENAZINE BIOSYNTHESIS PROTEIN IPR003719 Phenazine biosynthesis PhzF-like 8 277 5.3E-34
SUPERFAMILY SSF54506 Diaminopimelate epimerase-like - - 4 276 1.46E-67
PIRSF PIRSF016184 Ismrse_PhzF IPR003719 Phenazine biosynthesis PhzF-like 3 278 3.6E-61

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.