Pseudomonas aeruginosa UCBPP-PA14, PA14_48000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12128
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.20.20.70:FF:000281 Probable dihydrodipicolinate synthetase - - 4 295 0.0
SUPERFAMILY SSF51569 Aldolase - - 3 292 6.38E-80
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 3 301 2.8E-75
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 4 295 4.2E-80
SMART SM01130 DHDPS_2 IPR002220 DapA-like 6 294 7.1E-86
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 4 293 8.7E-51
CDD cd00408 DHDPS-like - - 10 290 1.09031E-92
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 8 291 6.7E-59
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 76 94 1.2E-9
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 133 150 1.2E-9
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 40 61 1.2E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.