Pseudomonas aeruginosa UCBPP-PA14, PA14_54000 (prpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0047547 2-methylcitrate dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02330
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051537 2 iron, 2 sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02330
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF103378
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019679 propionate metabolic process, methylcitrate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02330
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03972 MmgE/PrpD N-terminal domain IPR045336 MmgE/PrpD, N-terminal 18 268 5.5E-85
PANTHER PTHR16943 2-METHYLCITRATE DEHYDRATASE-RELATED IPR005656 MmgE/PrpD 8 492 0.0
Gene3D G3DSA:3.30.1330.120 - IPR042188 MmgE/PrpD superfamily, domain 2 298 437 0.0
NCBIfam TIGR02330 JCVI: 2-methylcitrate dehydratase IPR012705 2-methylcitrate dehydratase PrpD 14 494 0.0
Gene3D G3DSA:1.10.4100.10 - IPR042183 MmgE/PrpD superfamily, domain 1 16 481 0.0
SUPERFAMILY SSF103378 2-methylcitrate dehydratase PrpD IPR036148 MmgE/PrpD superfamily 13 492 0.0
Pfam PF19305 MmgE/PrpD C-terminal domain IPR045337 MmgE/PrpD, C-terminal 300 476 1.6E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.