Pseudomonas aeruginosa UCBPP-PA14, PA14_54510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00862
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class
Transcriptional regulators Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 124 223 3.2E-24
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 145 218 9.4E-20
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 173 9.68E-39
Gene3D G3DSA:6.10.250.690 - - - 81 118 2.3E-16
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 146 218 3.8E-18
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 112 6.1E-26
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 112 2.1E-38
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 1 220 7.1E-49
Gene3D G3DSA:3.40.50.2300 - - - 1 80 2.9E-17
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 132 218 3.97411E-25
FunFam G3DSA:3.40.50.2300:FF:000002 DNA-binding response regulator PhoP - - 1 80 3.2E-26
CDD cd17624 REC_OmpR_PmrA-like - - 3 117 4.97259E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.