Pseudomonas aeruginosa UCBPP-PA14, PA14_58380 (psdR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0090089	regulation of dipeptide transport	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA4499	ECO:0000250 sequence similarity evidence used in manual assertion	18667554	Reviewed by curator
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47413	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF07883	Cupin domain	IPR013096	Cupin 2, conserved barrel	109	175	1.8E-17
FunFam	G3DSA:1.10.260.40:FF:000051	Probable transcriptional regulator	-	-	3	86	4.9E-57
Gene3D	G3DSA:1.10.260.40	-	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	86	8.2E-14
SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	69	5.07E-13
Gene3D	G3DSA:2.60.120.10	Jelly Rolls	IPR014710	RmlC-like jelly roll fold	90	180	1.1E-15
Pfam	PF12844	Helix-turn-helix domain	IPR001387	Cro/C1-type helix-turn-helix domain	7	69	2.9E-8
SUPERFAMILY	SSF51182	RmlC-like cupins	IPR011051	RmlC-like cupin domain superfamily	57	179	2.41E-27
SMART	SM00530	mbf_short4	IPR001387	Cro/C1-type helix-turn-helix domain	9	64	3.1E-8
CDD	cd02209	cupin_XRE_C	-	-	92	177	7.71185E-26
CDD	cd00093	HTH_XRE	IPR001387	Cro/C1-type helix-turn-helix domain	7	64	5.36274E-11
PANTHER	PTHR46797	HTH-TYPE TRANSCRIPTIONAL REGULATOR	-	-	5	177	4.2E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.