Pseudomonas aeruginosa UCBPP-PA14, PA14_58470 (dppD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042938 dipeptide transport
IGI
Inferred from Genetic Interaction 		ECO:0000012
functional complementation evidence		 25338022 Reviewed by curator
Molecular Function GO:0042277 peptide binding
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 25338022 Reviewed by curator
Biological Process GO:0042938 dipeptide transport
IMP
Inferred from Mutant Phenotype
Term mapped from: dppF
 ECO:0000315
mutant phenotype evidence used in manual assertion		 25338022 Reviewed by curator
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015833 peptide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03257 ABC_NikE_OppD_transporters - - 3 235 2.14203E-110
NCBIfam TIGR01727 JCVI: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 231 314 2.8E-22
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 319 6.0E-91
FunFam G3DSA:3.40.50.300:FF:000016 Oligopeptide ABC transporter ATP-binding component - - 1 320 3.0E-120
Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 232 296 2.6E-16
PANTHER PTHR43297 OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD - - 1 316 5.5E-115
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 23 180 9.1E-28
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 31 230 3.1E-16
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 3 251 3.99E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.