Pseudomonas aeruginosa UCBPP-PA14, PA14_59150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003697 single-stranded DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04496
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03440 Homologous recombination 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau03430 Mismatch repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau03030 DNA replication 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF002070 SSB IPR011344 Single-stranded DNA-binding protein 1 156 3.2E-17
MobiDBLite mobidb-lite consensus disorder prediction - - 121 156 -
Pfam PF00436 Single-strand binding protein family IPR000424 Primosome PriB/single-strand DNA-binding 5 110 2.8E-12
NCBIfam TIGR00621 JCVI: single-stranded DNA-binding protein IPR011344 Single-stranded DNA-binding protein 8 155 4.5E-15
CDD cd04496 SSB_OBF IPR000424 Primosome PriB/single-strand DNA-binding 5 111 4.72839E-22
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 3 151 9.0E-22
MobiDBLite mobidb-lite consensus disorder prediction - - 1 25 -
MobiDBLite mobidb-lite consensus disorder prediction - - 121 148 -
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 4 156 1.65E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.