Pseudomonas aeruginosa UCBPP-PA14, PA14_59770 (rcsB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06170
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 159 230 8.5E-15
CDD cd17535 REC_NarL-like - - 21 126 2.79202E-29
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 18 149 7.54E-24
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 170 222 2.2E-9
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 170 220 1.00106E-9
Gene3D G3DSA:3.40.50.2300 - - - 19 230 5.5E-40
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 21 136 1.0E-17
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 167 224 3.2E-5
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 11 222 6.4E-30
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 19 136 2.8E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.