Pseudomonas aeruginosa UCBPP-PA14, PA14_60130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07514 Putative helicase IPR011119 Uncharacterised domain, helicase/relaxase, putative 24 338 1.2E-127
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 508 578 1.7E-18
Gene3D G3DSA:2.40.10.200 - - - 524 625 1.7E-18
NCBIfam TIGR03760 JCVI: integrating conjugative element relaxase, PFGI-1 class IPR022391 Integrating conjugative element relaxase, PFGI-1 class 24 240 1.1E-89
MobiDBLite mobidb-lite consensus disorder prediction - - 455 484 -
Gene3D G3DSA:1.10.3210.40 - - - 28 243 4.2E-61
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 504 630 5.98E-36
Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal 507 629 1.4E-38
MobiDBLite mobidb-lite consensus disorder prediction - - 455 489 -
NCBIfam NF041494 NCBIFAM: MobH family relaxase - - 29 358 2.0E-101

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.