Pseudomonas aeruginosa UCBPP-PA14, PA14_61750 (ipk)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00288
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00154
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016114 terpenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00154
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00900 Terpenoid backbone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55060 GHMP Kinase, C-terminal domain IPR036554 GHMP kinase, C-terminal domain superfamily 160 277 6.23E-33
Pfam PF08544 GHMP kinases C terminal IPR013750 GHMP kinase, C-terminal domain 205 254 2.5E-5
Gene3D G3DSA:3.30.230.10 - IPR014721 Small ribosomal subunit protein uS5 domain 2-type fold, subgroup 1 160 4.1E-59
Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 5 271 33.189445
NCBIfam TIGR00154 JCVI: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 4 278 3.2E-84
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like IPR020568 Ribosomal protein uS5 domain 2-type superfamily 7 158 4.93E-47
FunFam G3DSA:3.30.230.10:FF:000022 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase - - 1 160 5.3E-79
PIRSF PIRSF010376 IspE IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 3 279 6.8E-86
Gene3D G3DSA:3.30.70.890 - IPR036554 GHMP kinase, C-terminal domain superfamily 162 279 1.5E-29
Pfam PF00288 GHMP kinases N terminal domain IPR006204 GHMP kinase N-terminal domain 87 144 1.6E-10
PANTHER PTHR43527 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTIC - - 3 263 1.1E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.