Pseudomonas aeruginosa UCBPP-PA14, PA14_62540 (cbrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0090368 regulation of ornithine metabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4726
 ECO:0000249
sequence similarity evidence used in automatic assertion		 11401699
Biological Process GO:2000147 positive regulation of cell motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4726
 ECO:0000249
sequence similarity evidence used in automatic assertion		 21169488
Biological Process GO:2001158 positive regulation of proline catabolic process to glutamate
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4726
 ECO:0000249
sequence similarity evidence used in automatic assertion		 11401699
Biological Process GO:1900081 regulation of arginine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4726
 ECO:0000249
sequence similarity evidence used in automatic assertion		 11401699
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class
Transcriptional regulators Other UCBPP-PA14 genes in this class
Carbon compound catabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00009 AAA - - 156 313 4.94905E-28
Gene3D G3DSA:1.10.8.60 - - - 320 397 1.3E-21
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2 109 6.2E-28
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 109 2.2E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 119 140 -
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 142 319 4.8E-80
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 194 3.98E-37
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 149 315 5.5E-73
FunFam G3DSA:3.40.50.2300:FF:000794 - - - 2 129 4.6E-85
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 169 334 7.6E-11
Gene3D G3DSA:3.40.50.2300 - - - 2 129 7.5E-29
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 140 319 2.8E-69
FunFam G3DSA:1.10.8.60:FF:000120 Sigma-54-dependent Fis family transcriptional regulator - - 321 397 9.3E-30
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 1 470 0.0
CDD cd00156 REC - - 5 99 7.18967E-28
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 148 390 1.74E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.