Pseudomonas aeruginosa UCBPP-PA14, PA14_62600 (panD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004068 aspartate 1-decarboxylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21012
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006523 alanine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21012
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02261 Aspartate decarboxylase IPR003190 Aspartate decarboxylase 1 114 2.9E-45
Hamap MF_00446 Aspartate 1-decarboxylase [panD]. IPR003190 Aspartate decarboxylase 1 126 65.558861
SUPERFAMILY SSF50692 ADC-like IPR009010 Aspartate decarboxylase-like domain superfamily 1 120 2.49E-46
CDD cd06919 Asp_decarbox IPR003190 Aspartate decarboxylase 4 112 1.84592E-57
Gene3D G3DSA:2.40.40.20 - - - 1 126 6.6E-51
NCBIfam TIGR00223 JCVI: aspartate 1-decarboxylase IPR003190 Aspartate decarboxylase 1 126 6.4E-47
PANTHER PTHR21012 ASPARTATE 1-DECARBOXYLASE IPR003190 Aspartate decarboxylase 1 124 2.0E-46
PIRSF PIRSF006246 ADC IPR003190 Aspartate decarboxylase 1 125 6.2E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.