Pseudomonas aeruginosa UCBPP-PA14, PA14_67560 (typA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009405	pathogenesis	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23570569	Reviewed by curator
Biological Process	GO:1900190	regulation of single-species biofilm formation	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23570569	Reviewed by curator
Biological Process	GO:0009405	pathogenesis	IMP Inferred from Mutant Phenotype	ECO:0000016 loss-of-function mutant phenotype evidence	23570569	Reviewed by curator
Biological Process	GO:1900190	regulation of single-species biofilm formation	IMP Inferred from Mutant Phenotype	ECO:0000016 loss-of-function mutant phenotype evidence	23570569	Reviewed by curator
Biological Process	GO:0043709	cell adhesion involved in single-species biofilm formation	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5117	ECO:0000249 sequence similarity evidence used in automatic assertion	23570569
Biological Process	GO:0030254	protein secretion by the type III secretion system	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5117	ECO:0000249 sequence similarity evidence used in automatic assertion	23570569
Biological Process	GO:1902021	regulation of bacterial-type flagellum-dependent cell motility	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	17158671	Reviewed by curator
Biological Process	GO:1902021	regulation of bacterial-type flagellum-dependent cell motility	IMP Inferred from Mutant Phenotype	ECO:0000016 loss-of-function mutant phenotype evidence	17158671	Reviewed by curator
Biological Process	GO:0071236	cellular response to antibiotic	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5117	ECO:0000249 sequence similarity evidence used in automatic assertion	23570569
Biological Process	GO:0050714	positive regulation of protein secretion	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA5117	ECO:0000249 sequence similarity evidence used in automatic assertion	23570569
Molecular Function	GO:0005525	GTP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF03144	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003924	GTPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00009	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00315	GTP-binding elongation factor signature	IPR000795	Translational (tr)-type GTP-binding domain	87	98	1.1E-14
FunFam	G3DSA:3.40.50.300:FF:000055	GTP-binding protein TypA	-	-	1	198	3.0E-105
Pfam	PF00009	Elongation factor Tu GTP binding domain	IPR000795	Translational (tr)-type GTP-binding domain	4	195	4.8E-58
Hamap	MF_00849	50S ribosomal subunit assembly factor BipA [bipA].	IPR006298	GTP-binding protein BipA	3	601	44.745186
Gene3D	G3DSA:3.30.70.870	Elongation Factor G (Translational Gtpase), domain 3	-	-	306	590	0.0
PRINTS	PR00315	GTP-binding elongation factor signature	IPR000795	Translational (tr)-type GTP-binding domain	71	81	1.1E-14
SUPERFAMILY	SSF50447	Translation proteins	IPR009000	Translation protein, beta-barrel domain superfamily	151	299	1.79E-31
CDD	cd16263	BipA_III	IPR047043	GTP-binding protein BipA, domain 3	305	383	1.16501E-50
FunFam	G3DSA:2.40.30.10:FF:000016	GTP-binding protein TypA	-	-	199	299	6.9E-38
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	1	198	5.9E-72
Pfam	PF03144	Elongation factor Tu domain 2	IPR004161	Translation elongation factor EFTu-like, domain 2	219	289	8.4E-10
PRINTS	PR00315	GTP-binding elongation factor signature	IPR000795	Translational (tr)-type GTP-binding domain	51	59	1.1E-14
Gene3D	G3DSA:2.40.50.250	bipa protein	IPR042116	GTP-binding protein TypA/BipA, C-terminal	483	599	0.0
FunFam	G3DSA:3.30.70.870:FF:000003	GTP-binding protein TypA	-	-	306	420	4.0E-39
PRINTS	PR00315	GTP-binding elongation factor signature	IPR000795	Translational (tr)-type GTP-binding domain	7	20	1.1E-14
PANTHER	PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	-	-	200	598	2.7E-84
PRINTS	PR00315	GTP-binding elongation factor signature	IPR000795	Translational (tr)-type GTP-binding domain	123	132	1.1E-14
Gene3D	G3DSA:3.30.70.240	-	-	-	389	482	0.0
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	3	219	3.85E-60
SUPERFAMILY	SSF54980	EF-G C-terminal domain-like	IPR035647	EF-G domain III/V-like	398	512	1.82E-25
Coils	Coil	Coil	-	-	32	52	-
CDD	cd03710	BipA_TypA_C	IPR035651	BipA, domain V	398	476	2.77568E-42
FunFam	G3DSA:2.40.50.250:FF:000001	GTP-binding protein TypA	-	-	483	570	5.2E-32
CDD	cd03691	BipA_TypA_II	IPR047042	GTP-binding protein BipA, domain 2	205	298	1.74223E-40
NCBIfam	TIGR00231	JCVI: small GTP-binding protein domain	IPR005225	Small GTP-binding protein domain	5	134	3.8E-24
SUPERFAMILY	SSF54980	EF-G C-terminal domain-like	IPR035647	EF-G domain III/V-like	302	387	3.2E-15
CDD	cd01891	TypA_BipA	IPR047041	GTP-binding protein BipA, GTP-binding domain	4	197	9.32898E-129
NCBIfam	TIGR01394	JCVI: translational GTPase TypA/BipA	IPR006298	GTP-binding protein BipA	5	599	0.0
Pfam	PF00679	Elongation factor G C-terminus	IPR000640	Elongation factor EFG, domain V-like	397	477	2.3E-21
FunFam	G3DSA:3.30.70.240:FF:000002	GTP-binding protein TypA	-	-	389	482	8.5E-37
Gene3D	G3DSA:2.40.30.10	Translation factors	-	-	199	299	3.7E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.