Pseudomonas aeruginosa PA7, PSPA7_1223
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PA7
GCF_000017205.1|latest |
| Locus Tag |
PSPA7_1223
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1231688 - 1232344 (- strand) |
Cross-References
| RefSeq | YP_001346608.1 |
| GI | 152989083 |
| Entrez | 5354500 |
| NCBI Locus Tag | PSPA7_1223 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.89 |
| Kyte-Doolittle Hydrophobicity Value | -0.127 |
| Molecular Weight (kDa) | 23.9 |
| Isoelectric Point (pI) | 6.36 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4R0S | HYDROLASE | 08/01/14 | Crystal structure of P. aeruginosa TpbA | Pseudomonas aeruginosa PAO1 | 2.03 | X-RAY DIFFRACTION | 91.7 |
| 4R0T | HYDROLASE | 08/01/14 | Crystal structure of P. aeruginosa TpbA (C132S) in complex with pTyr | Pseudomonas aeruginosa PAO1 | 2.603 | X-RAY DIFFRACTION | 91.2 |
| 2M3V | HYDROLASE | 01/26/13 | Solution structure of tyrosine phosphatase related to biofilm formation A (TpbA) from Pseudomonas aeruginosa | Pseudomonas aeruginosa | NOT | SOLUTION NMR | 92.1 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 32 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001786 (406 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPA7_1223
|
Human Homologs
References
No references are associated with this feature.