Pseudomonas aeruginosa PA7, PSPA7_1408 (txcY )
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0015627 | type II protein secretion system complex | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
24748613 | Reviewed by curator |
| Biological Process | GO:0015628 | protein secretion by the type II secretion system |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF015761
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0015627 | type II protein secretion system complex |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF015761
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0009276 | Gram-negative-bacterium-type cell wall |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF015761
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pap03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1360.100 | General secretion pathway protein M, EpsM | - | - | 274 | 359 | 8.0E-7 |
| Gene3D | G3DSA:3.30.420.380 | - | - | - | 4 | 161 | 2.8E-29 |
| Pfam | PF12693 | GspL periplasmic domain | IPR025691 | GspL periplasmic domain | 209 | 358 | 6.0E-16 |
| NCBIfam | TIGR01709 | JCVI: type II secretion system protein GspL | IPR007812 | Type II secretion system protein GspL | 7 | 351 | 1.6E-55 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | IPR043129 | ATPase, nucleotide binding domain | 9 | 134 | 9.84E-24 |
| Pfam | PF05134 | Type II secretion system (T2SS), protein L | IPR024230 | GspL, cytoplasmic actin-ATPase-like domain | 35 | 165 | 8.7E-22 |
| PIRSF | PIRSF015761 | Protein_L | IPR007812 | Type II secretion system protein GspL | 19 | 359 | 5.0E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.