Pseudomonas aeruginosa PA7, PSPA7_1415 (txcR )

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015627 type II protein secretion system complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 24748613 Reviewed by curator
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 243 364 0.0048
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 216 490 1.1E-107
NCBIfam TIGR02533 JCVI: type II secretion system ATPase GspE IPR013369 Type II secretion system protein GspE 5 487 0.0
FunFam G3DSA:3.30.450.90:FF:000001 Type II secretion system ATPase GspE - - 82 214 2.4E-54
FunFam G3DSA:3.40.50.300:FF:000398 Type IV pilus assembly ATPase PilB - - 215 489 3.9E-113
Gene3D G3DSA:3.30.450.90 - - - 81 215 8.5E-48
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 116 382 4.7E-101
CDD cd01129 PulE-GspE-like - - 235 381 2.13784E-89
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 97 487 8.9E-99
Gene3D G3DSA:3.30.300.160 - IPR037257 Type II secretion system protein GspE, N-terminal superfamily 1 80 1.9E-18
SUPERFAMILY SSF160246 EspE N-terminal domain-like IPR037257 Type II secretion system protein GspE, N-terminal superfamily 6 65 2.51E-12
PANTHER PTHR30258 TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED - - 80 489 2.8E-124

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.