Pseudomonas aeruginosa PA7, PSPA7_1416 (txcQ )

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015627 type II protein secretion system complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 24748613 Reviewed by curator
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 566 580 4.8E-38
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 260 337 1.5E-14
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 191 254 1.7E-8
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 27 184 3.6E-45
NCBIfam TIGR02517 JCVI: type II secretion system secretin GspD IPR013356 Type II secretion system protein GspD 34 588 0.0
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 443 453 4.8E-38
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 337 347 4.8E-38
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 408 432 4.8E-38
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 255 338 4.1E-14
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 412 578 2.0E-49
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 185 254 4.9E-11
PANTHER PTHR30332 PROBABLE GENERAL SECRETION PATHWAY PROTEIN D - - 23 596 1.3E-112
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 126 182 7.6E-8
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 543 561 4.8E-38

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.