Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Cellular Component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PP_1070
|
ECO:0000250 sequence similarity evidence used in manual assertion |
18310026 | Reviewed by curator |
Biological Process | GO:0071705 | nitrogen compound transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01726
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pst02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pst02020 | Two-component system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF00528 | Binding-protein-dependent transport system inner membrane component | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 44 | 238 | 2.3E-26 |
PANTHER | PTHR30614 | MEMBRANE COMPONENT OF AMINO ACID ABC TRANSPORTER | IPR043429 | ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like | 24 | 238 | 7.0E-67 |
Gene3D | G3DSA:1.10.3720.10 | - | IPR035906 | MetI-like superfamily | 18 | 239 | 5.5E-50 |
NCBIfam | TIGR01726 | JCVI: ABC transporter permease subunit, His/Glu/Gln/Arg/opine family, N-terminal region | IPR010065 | Amino acid ABC transporter, permease protein, 3-TM domain | 24 | 131 | 7.6E-18 |
SUPERFAMILY | SSF161098 | MetI-like | IPR035906 | MetI-like superfamily | 24 | 223 | 5.76E-43 |
CDD | cd06261 | TM_PBP2 | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 29 | 228 | 2.70522E-19 |