Pseudomonas aeruginosa PAO1, PA5183.1 (rsmN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02599
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006402 mRNA catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02599
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006109 regulation of carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02599
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:2.60.40.4380:FF:000003 Carbon storage regulator - - 1 71 7.8E-50
Pfam PF02599 Global regulator protein family IPR003751 Translational regulator CsrA 4 67 2.0E-10
SUPERFAMILY SSF117130 CsrA-like IPR036107 Carbon storage regulator superfamily 3 67 1.2E-8
Gene3D G3DSA:2.60.40.4380 Translational regulator CsrA IPR036107 Carbon storage regulator superfamily 1 71 8.1E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.