Pseudomonas aeruginosa LESB58, PALES_55941 (amgR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051050 positive regulation of transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5200
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19706543
Biological Process GO:0045862 positive regulation of proteolysis
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5200
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19706543
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other LESB58 genes in this class
Antibiotic resistance and susceptibility Other LESB58 genes in this class
Transcriptional regulators Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2300:FF:000008 Two-component response regulator OmpR - - 9 90 1.0E-42
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 13 123 4.1E-31
FunFam G3DSA:1.10.10.10:FF:000023 Two-component response regulator OmpR - - 136 245 4.9E-59
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 161 238 1.2E-24
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 137 244 4.4E-29
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 7 132 8.25E-43
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 11 122 6.9E-44
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 12 240 1.0E-50
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 140 240 6.52E-26
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 151 238 9.61597E-27
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 166 238 5.0E-22
Gene3D G3DSA:3.40.50.2300 - - - 9 90 3.4E-22
Gene3D G3DSA:6.10.250.690 - - - 91 128 3.6E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.