Pseudomonas putida KT2440, PP_1746 (rsmI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006109 | regulation of carbohydrate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00167
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006402 | mRNA catabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00167
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00167
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR34984 | CARBON STORAGE REGULATOR | IPR003751 | Translational regulator CsrA | 1 | 58 | 8.1E-17 |
| Hamap | MF_00167 | Translational regulator CsrA [csrA]. | IPR003751 | Translational regulator CsrA | 1 | 58 | 14.819746 |
| Gene3D | G3DSA:2.60.40.4380 | Translational regulator CsrA | IPR036107 | Carbon storage regulator superfamily | 1 | 59 | 1.3E-21 |
| Pfam | PF02599 | Global regulator protein family | IPR003751 | Translational regulator CsrA | 1 | 52 | 2.8E-20 |
| SUPERFAMILY | SSF117130 | CsrA-like | IPR036107 | Carbon storage regulator superfamily | 1 | 53 | 9.94E-18 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.